Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932494.1_cds_XP_016479017.1_70597
CDS Infomation

[gene=LOC107800370] [db_xref=GeneID:107800370] [protein=pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X2] [protein_id=XP_016479017.1] [location=join(21684..21748,23054..23156,33548..34669)] [gbkey=CDS]
Sequence

ATGCAGTCCTCAAAAAAGCTATCAAACAGCTTAGGGCATATCGGCGTTTCAAGCATGCTC
TCCAGGGGTTTCTATAAGTTTTTGAAGAGAAATAACGGAAGGGAGGTTAGATCACGTTGG
ATGGATTGGGTCATGACCAGTTATTTGACCCAAAAATACTTTGGTCGGATTTATGAATGG
ATTGACAACTCGAAGCATCTTTGTATAACACCTGGAGATGTGGCAGTCCGACTGGATTTG
ATATCAAAAGCTCATGGTCTGGAAGCAGCAGAGGAGTATTTCGCTAGCATTCCAGATAAT
CTGAGATCTTCTTATGTATATGGCGCTCTTTTGAACTGCTATGCTGATGCAAAATCATTG
ATGAAAGCAGAAGGTACAATGCAAAAGATGAGGGATCTGGGGAATACTGACTTAGTGACT
TACAATGTTATGATGAACCTATATGCTAAAATGGGAGACCTTGAGAAACTACAGTCGTTA
GTGCAAGAGATGGAAGATAAGGGAATTGCTGGTAATGTAATCTCCTATACTATCCGCTTA
AATGCATATGTATCTGTTCCTGATGTAAAGGAGATGGAGAAACTTTTGATGAAGATGGAA
GAGGATTCTTTGCTGATTGATTGGAATGCTTATGCAGTCACTGCCAATGGATACATGAAA
GCTGGAGATGTAGAAAAGGCTTCAAAGGTATTAAGAAAATGTGAGCTCCTAGGTAAGGGG
AAAAATGCAAGGGTTGCTAATGAAAGCATGCTATGCCTCTACGCTAGTATGGGCAAGAAG
AATGATGTCTATCGTATATGGAAGAAATTAAAGAATAGAGGTAAGGTCTACAGTTCAAGT
TATCTTTCCATGATAAGTGGACTGGAAAAGTTAGATGATATTGATGGTGCAGAGAAGATA
TTTGCCGAGTGGGAAGCGAAAGAGGTATATTTTGATGCTAGAATTCCAAATTTGCTCATA
GCCGTTTACTGCAGAAAGGGTCATTTAGAAAAGGCTGAATCTATTATAGAAAGACTCTTG
GAGAGTGGGAAGAGGCCAAACTATAGGACATGGGATCGTCTGGCACTCGGATATTATTCA
CACAATCAGATGGAGAAGGCAGTTGAAACATTGAAGAAGGCGATCTTGGCAAGTATGCCC
CTGCGGACACCAAATATTCACAGTTGGGCTCCGTGCATTGATTACTTCCAGTCGAATGGA
GATACTGTAAGAGCAGAAGAGATTAAAAGATTGCTCAAGGAGCGAGGCATGTTCTCAGCA
GGGTATGAAAAGGTTGGAGAACTACAATAG

Peptide Sequence

PEP ID

XP_016479017.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MQSSKKLSNSLGHIGVSSMLSRGFYKFLKRNNGREVRSRWMDWVMTSYLTQKYFGRIYEW
IDNSKHLCITPGDVAVRLDLISKAHGLEAAEEYFASIPDNLRSSYVYGALLNCYADAKSL
MKAEGTMQKMRDLGNTDLVTYNVMMNLYAKMGDLEKLQSLVQEMEDKGIAGNVISYTIRL
NAYVSVPDVKEMEKLLMKMEEDSLLIDWNAYAVTANGYMKAGDVEKASKVLRKCELLGKG
KNARVANESMLCLYASMGKKNDVYRIWKKLKNRGKVYSSSYLSMISGLEKLDDIDGAEKI
FAEWEAKEVYFDARIPNLLIAVYCRKGHLEKAESIIERLLESGKRPNYRTWDRLALGYYS
HNQMEKAVETLKKAILASMPLRTPNIHSWAPCIDYFQSNGDTVRAEEIKRLLKERGMFSA
GYEKVGELQ

Transcript Sequence

Gene sequence data has not been registered.